{"id":4282,"date":"2014-10-28T07:55:24","date_gmt":"2014-10-28T07:55:24","guid":{"rendered":"https:\/\/mycor.iam.inrae.fr\/IAM\/?p=4282"},"modified":"2014-10-28T07:55:24","modified_gmt":"2014-10-28T07:55:24","slug":"article-applied-microbiology-and-biotechnology","status":"publish","type":"post","link":"https:\/\/mycor.iam.inrae.fr\/IAM\/?p=4282","title":{"rendered":"Article: Applied Microbiology and Biotechnology"},"content":{"rendered":"<p><a href=\"http:\/\/scholar.google.com\/citations?view_op=view_citation&amp;hl=fr&amp;user=_zC4pj4AAAAJ&amp;sortby=pubdate&amp;citation_for_view=_zC4pj4AAAAJ:geHnlv5EZngC\">Occurrence of lignin degradation genotypes and phenotypes among prokaryotes<\/a><\/p>\n<div>JH Tian, AM Pourcher, T Bouchez, E Gelhaye, P Peu<\/div>\n<div>Applied Microbiology and Biotechnology, 1-18<\/div>\n<div><\/div>\n<div>\n<h2>Abstract<\/h2>\n<div itemprop=\"description\">\n<p style=\"text-align: justify;\">A number of prokaryotes actively contribute to lignin degradation in nature and their activity could be of interest for many applications including the production of biogas\/biofuel from lignocellulosic biomass and biopulping. This review compares the reliability and efficiency of the culture-dependent screening methods currently used for the isolation of ligninolytic prokaryotes. Isolated prokaryotes exhibiting lignin-degrading potential are presented according to their phylogenetic groups. With the development of bioinformatics, culture-independent techniques are emerging that allow larger-scale data mining for ligninolytic prokaryotic functions but today, these techniques still have some limits. In this work, two phylogenetic affiliations of isolated prokaryotes exhibiting ligninolytic potential and laccase-encoding prokaryotes were determined on the basis of 16S\u00a0<a href=\"http:\/\/link.springer.com\/search?dc.title=rDNA&amp;facet-content-type=ReferenceWorkEntry&amp;sortOrder=relevance\">rDNA<\/a>sequences, providing a comparative view of results obtained by the two types of screening techniques. The combination of laboratory culture and bioinformatics approaches is a promising way to explore lignin-degrading prokaryotes.<\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>Occurrence of lignin degradation genotypes and phenotypes among prokaryotes JH Tian, AM Pourcher, T Bouchez, E Gelhaye, P Peu Applied Microbiology and Biotechnology, 1-18 Abstract A number of prokaryotes actively contribute to lignin degradation in nature and their activity could &hellip; <a href=\"https:\/\/mycor.iam.inrae.fr\/IAM\/?p=4282\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[2],"tags":[],"class_list":["post-4282","post","type-post","status-publish","format-standard","hentry","category-academic-productions"],"_links":{"self":[{"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=\/wp\/v2\/posts\/4282","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=4282"}],"version-history":[{"count":0,"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=\/wp\/v2\/posts\/4282\/revisions"}],"wp:attachment":[{"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=4282"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=4282"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/mycor.iam.inrae.fr\/IAM\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=4282"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}