Publications 2015

1. Evolving insights to understanding mycorrhizas. IA Dickie, I Alexander, S Lennon, M Öpik, MA Selosse, MGA Heijden, … New Phytologist 205 (4), 1369-1374
2. Mycorrhizal ecology and evolution: the past, the present, and the future MGA Heijden, FM Martin, MA Selosse, IR Sanders. New Phytologist
3. Candidate Effector Proteins of the Rust Pathogen Melampsora Larici-Populina Target Diverse Plant Cell Compartments B Petre, DGO Saunders, J Sklenar, C Lorrain, J Win, S Duplessis, … Molecular Plant-Microbe Interactions
4. Involvement of thiol-based mechanisms in plant development N Rouhier, D Cerveau, J Couturier, JP Reichheld, P Rey. Biochimica et Biophysica Acta (BBA)-General Subject
5. Certainties and uncertainties about the life cycle of the Périgord black truffle (Tuber melanosporum Vittad.) F. LeTacon, A Rubini, C Murat, C. Riccioni, C Robin… Annals of Forest Science
6. A survey of genome-wide single nucleotide polymorphisms through genome re-sequencing in the Périgord black truffle (Tuber melanosporum Vittad.) T Payen, C Murat, A Gigant, E Morin, S De Mita and F Martin. Molecular Ecology Resources
7. Arabidopsis glutaredoxin S17 and its partner NF-YC11/NC2α contribute to maintenance of the shoot apical meristem under long-day photoperiod J Knuesting, C Riondet, C Maria, I Kruse, N Becuwe, N König, C Berndt, … Plant Physiology, pp. 00049.2015
8. Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists A Kohler, A Kuo, LG Nagy, E Morin, KW Barry, F Buscot, B Canbäck, …Nature Genetics
9. Volatile signalling by sesquiterpenes from ectomycorrhizal fungi reprogrammes root architecture. FA Ditengou, A Müller, M Rosenkranz, J Felten, H Lasok, MM van Doorn, … Nature communications 6, 6279
10. Relationship between the genetic characteristics of Botrytis sp. airborne inoculum and meteorological parameters, seasons and the origin of air masses C Leyronas, F Halkett, PC Nicot. Aerobiologia, 1-14
11. Evidence for homoploid speciation in Phytophthora alni supports taxonomic reclassification in this species complex C Husson, J Aguayo, C Revellin, P Frey, R Ioos, B Marçais. Fungal Genetics and Biology
12. Pseudomonas fluorescens pirates both ferrioxamine and ferri-coelichelin siderophores from Streptomyces ambofaciens. J Galet, A Deveau, L Hôtel, P Frey-Klett, P Leblond, B Aigle. Applied and Environmental Microbiology, 03520-14
13. Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria rich microbiome CA Quandt, A Kohler, C Hesse, T Sharpton, F Martin, JW Spatafora. Environmental Microbiology
14. Function of glutathione peroxidases in legume root nodules MA Matamoros, A Saiz, M Peñuelas, P Bustos-Sanmamed, JM Mulet, … Journal of Experimental Botany, erv066
15. Common and metal-specific proteomic responses to cadmium and zinc in the metal tolerant ericoid mycorrhizal fungus Oidiodendron maius Zn  M Chiapello, E Martino, S Perotto Metallomics
16. Can mosses serve as model organisms for forest research? S Müller, D Gütle, JP Jacquot, R Reski. Annals of Forest Science.
17. Plants, fungi and oomycetes: a 400‐million year affair that shapes the biosphere. MA Selosse, C Strullu‐Derrien, FM Martin, S Kamoun, P Kenrick. New Phytologist 206 (2), 501-506
18. PtaRHE1, a Populus tremula x P. alba RING‐H2 protein of the ATL family, has a regulatory role in secondary phloem fiber development F Baldacci‐Cresp, J Moussawi, JC Leplé, R Van Acker, A Kohler, … The Plant Journal
19. Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies. C Plomion, JM Aury, J Amselem, T Alaeitabar, V Barbe, C Belser, … Molecular Ecology Resources
20. Compartmentalized and contrasted response of ectomycorrhizal and soil fungal communities of Scots pine forests along elevation gradients in France and Spain. A Rincón, B Santamaría‐Pérez, SG Rabasa, A Coince, B Marçais, … Environmental Microbiology
21. An evolutionary ecology perspective to address forest pathology challenges of today and tomorrow. ML Desprez-Loustau, J Aguayo, C Dutech, KJ Hayden, C Husson, …Annals of Forest Science, 1-23
22. Functional guild classification predicts the enzymatic role of fungi in litter and soil biogeochemistry JM Talbot, F Martin, A Kohler, B Henrissat, KG Peay. Soil Biology and Biochemistry
23. Fine-scale spatial genetic structure analysis of the black truffle Tuber aestivum and its link to aroma variability. V Molinier, C Murat, H Crochet, D Wipf, R Splivallo. Environmental Microbiology
24. Assessment of inoculation methods for screening black alder resistance to Phytophthora× alni. A Chandelier, C Husson, P Druart, B Marçais. Plant Pathology
25. SSR-based identification of genetic groups within European populations of Tuber aestivum Vittad. V Molinier, C Murat, M Peter, A Golotte, H De la Varga,… Mycorrhiza
26. Forest tree genomics: 10 achievements from the past 10 years and future prospects. C Plomion, C Bastien, MB Bogeat-Triboulot, L Bouffier, A Déjardin, … Annals of Forest Science, 1-27
27. Simultaneous monitoring and quantification of Melampsora allii-populina and Melampsora larici-populina on infected poplar leaves using a duplex real-time PCR assay. C. Guinet, AL Boutigny, A Vialle, RC Hammelin, P Frey, R Ioos. Plant pathology
28. Characterization of glutathione transferases involved in the pathogenicity of Alternaria brassicicola. B Calmes, M Morel-Rouhier, N Bataillé-Simoneau, E Gelhaye, T Guillemette, P Simoneau. BMC Microbiology
29. Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus MH Perlin, J Amselem, E Fontanillas, S San Toh, Z Chen, J Goldberg, … BMC Genomics 16 (1), 1-24, 2015
30. Development of the Populus-Laccaria bicolor ectomycorrhiza modifies root auxin metabolism, signalling and response. A Vayssières, A Pěnčík, J Felten, A Kohler, K Ljung, FM Martin, V Legue. Plant Physiology, pp. 114.255620
31. Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites BC Thomson, E Tisserant, P Plassart, S Uroz, RI Griffiths, SE Hannula, … Soil Biology and Biochemistry
32. Quinone-and nitroreductase reactions of Thermotoga maritima thioredoxin reductase. B Valiauga, N Rouhier, JP Jacquot, N Čėnas. Acta biochimica Polonica
33. Reconsidering mutualistic plant–fungal interactions through the lens of effector biology. JM Plett, F Martin. Current Opinion in Plant Biology 26, 45-50
34. Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis J Doré, M Perraud, C Dieryckx, A Kohler, E Morin, B Henrissat, …New Phytologist
35. Draft Genome Sequence of Burkholderia sp. Strain PML1 (12), an Ectomycorrhizosphere-Inhabiting Bacterium with Effective Mineral-Weathering Ability. S Uroz, P Oger Genome announcements 3 (4), e00798-15
36. Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe. RE Creamer, SE Hannula, JP Van Leeuwen, D Stone, M Rutgers, … Applied Soil Ecology
37. Evolutionary divergence of Ure2pA glutathione transferases in wood degrading fungi. T Roret, A Thuillier, F Favier, E Gelhaye, C Didierjean, M Morel-Rouhier. Fungal Genetics and Biology
38. Total phenolic and lignin contents, phytochemical screening, antioxidant and fungal inhibition properties of the heartwood extractives of ten Congo Basin tree species. S Mounguengui, JBS Tchinda, MK Ndikontar, S Dumarçay, C Attéké, … Annals of Forest Science, 1-10
39. Pre-existing forests as sources of pathogens? The emergence of Armillaria ostoyae in a recently planted pine forest F Labbé, B Marcais, JL Dupouey, T Bélouard, X Capdevielle, D Piou, …. Forest Ecology and Management 357, 248-258
40. The GSTome Reflects the Chemical Environment of White-Rot Fungi. A Deroy, F Saiag, Z Kebbi-Benkeder, N Touahri, A Hecker, … PloS one 10 (10), e0137083
41. Rust fungal effectors mimic host transit peptides to translocate into chloroplasts. B Petre, C Lorrain, D Saunders, S Duplessis, S Kamoun. Cellular Microbiology, DOI: 10.1111/cmi.12530
42. Profiling the Succession of Bacterial Communities throughout the Life Stages of a Higher Termite Nasutitermes arborum (Termitidae, Nasutitermitinae) Using 16S rRNA Gene Pyrosequencing M Diouf, V Roy, P Mora, S Frechault, T Lefebvre, V Hervé, … PLoS ONE 10 (10), e0140014
43. Highly Efficient CYP167A1 (EpoK) dependent Epothilone B Formation and Production of 7-Ketone Epothilone D as a New Epothilone Derivative. F Kern, T K. F. Dier, Y Khatri , K M. Ewen, JPJacquot, DA. Volmer, R Bernhardt. Scientific Reports | 5:14881 | DOI: 10.1038/srep14881
44. The mitochondrial monothiol glutaredoxin S15 is essential for iron-sulfur protein maturation in Arabidopsis thaliana. A Moseler, I Aller, S Wagner, T Nietzel, J Przybyla-Toscano, U Mühlenhoff, … Proceedings of the National Academy of Sciences, 201510835
45. History and Philosophy of Biology. By Robert Kretsinger. World Scientific, 2015. Pp. 364. JP Jacquot. Acta crystallographica section D.
46. Study of nitrogen and carbon transfer from soil organic matter to Tuber melanosporum mycorrhizas and ascocarps using 15N and 13C soil labelling and whole-genome oligoarrays F Le Tacon, B Zeller, C Plain, C Hossann, C Bréchet, F Martin, A Kohler, … Plant and Soil 395 (1-2), 351-373
47. Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors. F Shah, C Nicolás, J Bentzer, M Ellström, M Smits, F Rineau, B Canbäck, … New Phytologist
48. The Mineralosphere Concept: Mineralogical Control of the Distribution and Function of Mineral-associated Bacterial Communities. S. Uroz, L. Kelly, MP Turpault, C Lepleux, P Frey-Klett. Trends in Microbiology.
49. Effector-mining in the poplar rust fungus Melampsora larici populina secretome. C Lorrain, A Hecker, S Duplessis. Frontiers in Plant Science 6, 1051
50. Comparative Analysis of secretomes from ectomycorrhizal fungi with emphasis on small-secreted proteins. C. Pellegrin, E Morin, F Martin, C Veneault-Fourrey. Frontiers in Microbiology.10.3389/fmicb.2015.01278
51. Comparative genomics of early-diverging mushroom-forming fungi provides insights into the origins of lignocellulose decay capabilities. LG Nagy, R Riley, A Tritt, C Adam, C Daum, D Floudas, H Sun, JS Yadav, … Molecular Biology and Evolution, msv337
52. Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa. PA Lallement, T Roret, P Tsan, JM Gualberto, JM Girardet, … Biochemical Journal, BJ20151147